Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC092580.3-201ENST00000430932 139 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AL671277.1-201ENST00000429656 993 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AL353779.1-201ENST00000434793 351 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC104794.3-201ENST00000566840 1248 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TUBB1P2-201ENST00000422712 1306 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TUBB1P1-201ENST00000503144 1300 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AP006294.1-201ENST00000415407 339 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AC148477.5-201ENST00000625164 1645 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 RN7SL219P-201ENST00000582872 296 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 RPS15P9-201ENST00000494093 319 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AC106872.11-201ENST00000605838 421 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 BSG-214ENST00000614867 960 ntTSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AL691432.2-201ENST00000607222 2038 ntBASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC9.73□□□□□ -0.85
UBR4Q5T4S7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
UBR4Q5T4S7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms