Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 TSPY22P-201ENST00000427496 604 ntBASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 KRT18P35-201ENST00000510488 1269 ntBASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN20Q4JDL3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 AC010331.1-201ENST00000611423 582 ntBASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN20Q4JDL3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AC068472.1-201ENST00000474589 881 ntBASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AL445228.2-201ENST00000605589 952 ntBASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 AC116407.4-201ENST00000623319 1061 ntBASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN20Q4JDL3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 AC112698.1-201ENST00000510299 916 ntBASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms