Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.92■□□□□ 0.94
IRX3P78415 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.92■□□□□ 0.94
IRX3P78415 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
IRX3P78415 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
IRX3P78415 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IRX3P78415 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.91■□□□□ 0.94
IRX3P78415 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
IRX3P78415 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 BX842568.4-201ENST00000421222 227 ntBASIC20.91■□□□□ 0.94
IRX3P78415 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.91■□□□□ 0.94
IRX3P78415 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.91■□□□□ 0.94
IRX3P78415 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.91■□□□□ 0.94
IRX3P78415 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.91■□□□□ 0.94
IRX3P78415 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.91■□□□□ 0.94
IRX3P78415 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 AP005117.1-201ENST00000584346 1413 ntBASIC20.91■□□□□ 0.94
IRX3P78415 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.91■□□□□ 0.94
IRX3P78415 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.91■□□□□ 0.94
IRX3P78415 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.91■□□□□ 0.94
IRX3P78415 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
IRX3P78415 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
IRX3P78415 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX3P78415 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX3P78415 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX3P78415 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 ABCD1P5-201ENST00000445663 754 ntBASIC20.9■□□□□ 0.94
IRX3P78415 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.9■□□□□ 0.94
IRX3P78415 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 AC021087.4-201ENST00000563761 564 ntBASIC20.9■□□□□ 0.94
IRX3P78415 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.9■□□□□ 0.94
IRX3P78415 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
IRX3P78415 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
IRX3P78415 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IRX3P78415 BX323043.1-201ENST00000641006 1765 ntBASIC20.9■□□□□ 0.94
IRX3P78415 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
IRX3P78415 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX3P78415 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX3P78415 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IRX3P78415 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
IRX3P78415 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IRX3P78415 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX3P78415 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
IRX3P78415 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX3P78415 SART3-203ENST00000546611 1184 ntBASIC20.89■□□□□ 0.93
IRX3P78415 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
IRX3P78415 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.89■□□□□ 0.93
IRX3P78415 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.89■□□□□ 0.93
IRX3P78415 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
IRX3P78415 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IRX3P78415 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
IRX3P78415 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
IRX3P78415 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.88■□□□□ 0.93
IRX3P78415 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.88■□□□□ 0.93
IRX3P78415 KRT18P65-201ENST00000439811 1286 ntBASIC20.88■□□□□ 0.93
IRX3P78415 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IRX3P78415 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.88■□□□□ 0.93
IRX3P78415 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
IRX3P78415 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.88■□□□□ 0.93
IRX3P78415 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
IRX3P78415 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms