Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
AP1S1P61966 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.1■□□□□ 0.49
AP1S1P61966 AP000867.3-201ENST00000524675 377 ntBASIC18.1■□□□□ 0.49
AP1S1P61966 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.1■□□□□ 0.49
AP1S1P61966 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.1■□□□□ 0.49
AP1S1P61966 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.1■□□□□ 0.49
AP1S1P61966 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
AP1S1P61966 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP1S1P61966 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 KRT8P47-201ENST00000604727 1398 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 KRT17P6-201ENST00000453795 1220 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.09■□□□□ 0.49
AP1S1P61966 AC104819.1-201ENST00000504587 486 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
AP1S1P61966 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.09■□□□□ 0.49
AP1S1P61966 AP005901.3-202ENST00000581653 237 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 AC116407.2-201ENST00000613639 860 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
AP1S1P61966 NEFHP1-201ENST00000412845 2629 ntBASIC18.09■□□□□ 0.49
AP1S1P61966 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
AP1S1P61966 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.09■□□□□ 0.49
AP1S1P61966 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP1S1P61966 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
AP1S1P61966 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S1P61966 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.08■□□□□ 0.49
AP1S1P61966 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S1P61966 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S1P61966 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP1S1P61966 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
AP1S1P61966 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP1S1P61966 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.08■□□□□ 0.48
AP1S1P61966 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.08■□□□□ 0.48
AP1S1P61966 AC091607.1-201ENST00000490318 1060 ntBASIC18.08■□□□□ 0.48
AP1S1P61966 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.08■□□□□ 0.48
AP1S1P61966 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.08■□□□□ 0.48
AP1S1P61966 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.08■□□□□ 0.48
AP1S1P61966 AC074051.2-201ENST00000565115 352 ntBASIC18.08■□□□□ 0.48
AP1S1P61966 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
AP1S1P61966 AC005336.2-201ENST00000593183 939 ntBASIC18.08■□□□□ 0.48
AP1S1P61966 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP1S1P61966 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.08■□□□□ 0.48
AP1S1P61966 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
AP1S1P61966 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP1S1P61966 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP1S1P61966 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.07■□□□□ 0.48
AP1S1P61966 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP1S1P61966 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.07■□□□□ 0.48
AP1S1P61966 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP1S1P61966 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms