Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB4P54760 AC027796.2-201ENST00000575326 344 ntBASIC20.22■□□□□ 0.83
EPHB4P54760 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.22■□□□□ 0.83
EPHB4P54760 AC024563.2-201ENST00000603282 481 ntBASIC20.22■□□□□ 0.83
EPHB4P54760 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHB4P54760 BICD1-207ENST00000551848 1962 ntBASIC20.22■□□□□ 0.83
EPHB4P54760 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
EPHB4P54760 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHB4P54760 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHB4P54760 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 AC020916.1-201ENST00000587762 1774 ntBASIC20.21■□□□□ 0.83
EPHB4P54760 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHB4P54760 PMS2P2-201ENST00000425039 1128 ntBASIC20.21■□□□□ 0.83
EPHB4P54760 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.21■□□□□ 0.83
EPHB4P54760 AC011840.4-201ENST00000578471 627 ntBASIC20.21■□□□□ 0.83
EPHB4P54760 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.21■□□□□ 0.83
EPHB4P54760 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHB4P54760 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHB4P54760 AL354751.1-201ENST00000412768 1863 ntBASIC20.21■□□□□ 0.83
EPHB4P54760 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EPHB4P54760 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHB4P54760 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 AL512353.2-201ENST00000448759 1962 ntBASIC20.21■□□□□ 0.83
EPHB4P54760 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.21■□□□□ 0.83
EPHB4P54760 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EPHB4P54760 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 NOC2LP2-201ENST00000407594 1944 ntBASIC20.2■□□□□ 0.82
EPHB4P54760 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHB4P54760 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.2■□□□□ 0.82
EPHB4P54760 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHB4P54760 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.2■□□□□ 0.82
EPHB4P54760 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.2■□□□□ 0.82
EPHB4P54760 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.2■□□□□ 0.82
EPHB4P54760 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.2■□□□□ 0.82
EPHB4P54760 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHB4P54760 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.2■□□□□ 0.82
EPHB4P54760 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 NOC2LP1-202ENST00000452600 2235 ntBASIC20.2■□□□□ 0.82
EPHB4P54760 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 Z98044.1-201ENST00000632503 1764 ntBASIC20.2■□□□□ 0.82
EPHB4P54760 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.2■□□□□ 0.82
EPHB4P54760 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHB4P54760 TEX21P-204ENST00000641479 1693 ntBASIC20.19■□□□□ 0.82
EPHB4P54760 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.19■□□□□ 0.82
EPHB4P54760 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 AIRN-201ENST00000601203 4374 ntBASIC20.19■□□□□ 0.82
EPHB4P54760 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.19■□□□□ 0.82
EPHB4P54760 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EPHB4P54760 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHB4P54760 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHB4P54760 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHB4P54760 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.18■□□□□ 0.82
EPHB4P54760 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms