Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLTCL1P53675 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.59■■□□□ 1.69
CLTCL1P53675 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC25.59■■□□□ 1.69
CLTCL1P53675 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLTCL1P53675 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC25.59■■□□□ 1.69
CLTCL1P53675 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC25.59■■□□□ 1.69
CLTCL1P53675 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLTCL1P53675 PRYP5-201ENST00000451909 266 ntBASIC25.59■■□□□ 1.69
CLTCL1P53675 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.59■■□□□ 1.69
CLTCL1P53675 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC25.59■■□□□ 1.69
CLTCL1P53675 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CLTCL1P53675 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CLTCL1P53675 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLTCL1P53675 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.58■■□□□ 1.69
CLTCL1P53675 WIZP1-201ENST00000531444 2299 ntBASIC25.58■■□□□ 1.69
CLTCL1P53675 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC25.58■■□□□ 1.69
CLTCL1P53675 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CLTCL1P53675 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC25.58■■□□□ 1.69
CLTCL1P53675 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC25.58■■□□□ 1.69
CLTCL1P53675 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLTCL1P53675 AC103564.2-201ENST00000432853 1299 ntBASIC25.58■■□□□ 1.69
CLTCL1P53675 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC25.58■■□□□ 1.69
CLTCL1P53675 CYB561-217ENST00000582997 877 ntTSL 5 BASIC25.58■■□□□ 1.69
CLTCL1P53675 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC25.58■■□□□ 1.69
CLTCL1P53675 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CLTCL1P53675 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CLTCL1P53675 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CLTCL1P53675 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC25.57■■□□□ 1.68
CLTCL1P53675 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC25.57■■□□□ 1.68
CLTCL1P53675 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC25.57■■□□□ 1.68
CLTCL1P53675 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CLTCL1P53675 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC25.57■■□□□ 1.68
CLTCL1P53675 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
CLTCL1P53675 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.57■■□□□ 1.68
CLTCL1P53675 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.57■■□□□ 1.68
CLTCL1P53675 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC25.57■■□□□ 1.68
CLTCL1P53675 AL691403.2-201ENST00000618460 490 ntBASIC25.57■■□□□ 1.68
CLTCL1P53675 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CLTCL1P53675 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CLTCL1P53675 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CLTCL1P53675 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CLTCL1P53675 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 BEX3-201ENST00000361298 921 ntTSL 2 BASIC25.56■■□□□ 1.68
CLTCL1P53675 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 COX5BP2-201ENST00000392354 334 ntBASIC25.56■■□□□ 1.68
CLTCL1P53675 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.56■■□□□ 1.68
CLTCL1P53675 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.56■■□□□ 1.68
CLTCL1P53675 AC002347.1-201ENST00000569543 541 ntBASIC25.56■■□□□ 1.68
CLTCL1P53675 AC004706.3-202ENST00000621574 984 ntBASIC25.56■■□□□ 1.68
CLTCL1P53675 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC25.56■■□□□ 1.68
CLTCL1P53675 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC25.56■■□□□ 1.68
CLTCL1P53675 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC25.56■■□□□ 1.68
CLTCL1P53675 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.56■■□□□ 1.68
CLTCL1P53675 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLTCL1P53675 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.56■■□□□ 1.68
CLTCL1P53675 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC25.55■■□□□ 1.68
CLTCL1P53675 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CLTCL1P53675 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC25.55■■□□□ 1.68
CLTCL1P53675 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.55■■□□□ 1.68
CLTCL1P53675 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CLTCL1P53675 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CLTCL1P53675 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC25.55■■□□□ 1.68
CLTCL1P53675 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 AC022898.2-201ENST00000616822 1312 ntBASIC25.55■■□□□ 1.68
CLTCL1P53675 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC25.55■■□□□ 1.68
CLTCL1P53675 AL020989.1-201ENST00000422979 469 ntBASIC25.55■■□□□ 1.68
CLTCL1P53675 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.55■■□□□ 1.68
CLTCL1P53675 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.55■■□□□ 1.68
CLTCL1P53675 AL589182.2-201ENST00000619332 1049 ntBASIC25.55■■□□□ 1.68
CLTCL1P53675 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.55■■□□□ 1.68
CLTCL1P53675 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CLTCL1P53675 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLTCL1P53675 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 AC009949.1-201ENST00000623048 1830 ntBASIC25.54■■□□□ 1.68
CLTCL1P53675 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC25.54■■□□□ 1.68
CLTCL1P53675 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC25.54■■□□□ 1.68
CLTCL1P53675 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms