Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC25A1P53007 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC25A1P53007 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC25A1P53007 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 MIR4497-201ENST00000583208 89 ntBASIC16.01■□□□□ 0.15
SLC25A1P53007 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
SLC25A1P53007 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC25A1P53007 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC25A1P53007 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC25A1P53007 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SLC25A1P53007 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16■□□□□ 0.15
SLC25A1P53007 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16■□□□□ 0.15
SLC25A1P53007 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC25A1P53007 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16■□□□□ 0.15
SLC25A1P53007 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16■□□□□ 0.15
SLC25A1P53007 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC25A1P53007 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
SLC25A1P53007 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 ECEL1P3-201ENST00000427961 737 ntBASIC15.99■□□□□ 0.15
SLC25A1P53007 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 TSPY15P-201ENST00000457163 923 ntBASIC15.99■□□□□ 0.15
SLC25A1P53007 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC25A1P53007 ECEL1P2-202ENST00000465689 757 ntBASIC15.99■□□□□ 0.15
SLC25A1P53007 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC25A1P53007 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 AL157888.1-201ENST00000631930 593 ntBASIC15.99■□□□□ 0.15
SLC25A1P53007 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
SLC25A1P53007 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC25A1P53007 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC25A1P53007 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 LINC00304-203ENST00000565008 1864 ntBASIC15.99■□□□□ 0.15
SLC25A1P53007 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.99■□□□□ 0.15
SLC25A1P53007 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC25A1P53007 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC25A1P53007 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC25A1P53007 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC25A1P53007 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC25A1P53007 LINC00602-201ENST00000629776 2065 ntBASIC15.98■□□□□ 0.15
SLC25A1P53007 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms