Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCN4P51793 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN4P51793 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCN4P51793 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN4P51793 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 AP002414.3-201ENST00000589352 1468 ntBASIC18.88■□□□□ 0.61
CLCN4P51793 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLCN4P51793 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLCN4P51793 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CLCN4P51793 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CLCN4P51793 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 UPF3AP3-201ENST00000420996 769 ntBASIC18.87■□□□□ 0.61
CLCN4P51793 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLCN4P51793 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCN4P51793 UNC93B6-202ENST00000528242 690 ntBASIC18.87■□□□□ 0.61
CLCN4P51793 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.87■□□□□ 0.61
CLCN4P51793 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.87■□□□□ 0.61
CLCN4P51793 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.87■□□□□ 0.61
CLCN4P51793 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 AL691403.2-201ENST00000618460 490 ntBASIC18.87■□□□□ 0.61
CLCN4P51793 AC132938.6-201ENST00000623828 1655 ntBASIC18.87■□□□□ 0.61
CLCN4P51793 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN4P51793 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CLCN4P51793 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCN4P51793 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLCN4P51793 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLCN4P51793 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLCN4P51793 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.86■□□□□ 0.61
CLCN4P51793 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.86■□□□□ 0.61
CLCN4P51793 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLCN4P51793 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLCN4P51793 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 LAGE3P1-201ENST00000425356 484 ntBASIC18.86■□□□□ 0.61
CLCN4P51793 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.86■□□□□ 0.61
CLCN4P51793 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.86■□□□□ 0.61
CLCN4P51793 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 CROCCP3-202ENST00000420820 1947 ntBASIC18.86■□□□□ 0.61
CLCN4P51793 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLCN4P51793 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.86■□□□□ 0.61
CLCN4P51793 ANO7L1-203ENST00000602586 1720 ntBASIC18.86■□□□□ 0.61
CLCN4P51793 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLCN4P51793 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 GMCL1P1-201ENST00000463439 1581 ntBASIC18.85■□□□□ 0.61
CLCN4P51793 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCN4P51793 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLCN4P51793 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 RPSAP43-201ENST00000402237 625 ntBASIC18.85■□□□□ 0.61
CLCN4P51793 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.85■□□□□ 0.61
CLCN4P51793 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 AC010327.4-202ENST00000591484 748 ntBASIC18.85■□□□□ 0.61
CLCN4P51793 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.85■□□□□ 0.61
CLCN4P51793 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLCN4P51793 AC093503.3-201ENST00000624917 2352 ntBASIC18.85■□□□□ 0.61
CLCN4P51793 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.85■□□□□ 0.61
CLCN4P51793 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 AC079776.2-201ENST00000641154 1609 ntBASIC18.85■□□□□ 0.61
CLCN4P51793 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLCN4P51793 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms