Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC007613.1-201ENST00000572811 2597 ntBASIC20.32■□□□□ 0.84
USP11P51784 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.32■□□□□ 0.84
USP11P51784 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.32■□□□□ 0.84
USP11P51784 AC096633.1-201ENST00000422446 749 ntBASIC20.32■□□□□ 0.84
USP11P51784 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.32■□□□□ 0.84
USP11P51784 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.32■□□□□ 0.84
USP11P51784 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.32■□□□□ 0.84
USP11P51784 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 NSUN5P1-202ENST00000421140 1535 ntBASIC20.32■□□□□ 0.84
USP11P51784 NSUN5P2-203ENST00000457352 1529 ntBASIC20.32■□□□□ 0.84
USP11P51784 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP11P51784 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.31■□□□□ 0.84
USP11P51784 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.31■□□□□ 0.84
USP11P51784 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.31■□□□□ 0.84
USP11P51784 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.31■□□□□ 0.84
USP11P51784 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
USP11P51784 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.31■□□□□ 0.84
USP11P51784 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.31■□□□□ 0.84
USP11P51784 SLC25A6P5-201ENST00000435663 894 ntBASIC20.31■□□□□ 0.84
USP11P51784 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.31■□□□□ 0.84
USP11P51784 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.31■□□□□ 0.84
USP11P51784 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.31■□□□□ 0.84
USP11P51784 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP11P51784 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
USP11P51784 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP11P51784 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP11P51784 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
USP11P51784 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.3■□□□□ 0.84
USP11P51784 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.3■□□□□ 0.84
USP11P51784 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.3■□□□□ 0.84
USP11P51784 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.3■□□□□ 0.84
USP11P51784 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 AC100803.2-201ENST00000562459 1963 ntBASIC20.3■□□□□ 0.84
USP11P51784 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP11P51784 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP11P51784 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
USP11P51784 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
USP11P51784 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.29■□□□□ 0.84
USP11P51784 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms