Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF4P48230 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF4P48230 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF4P48230 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF4P48230 AC067863.1-201ENST00000494933 530 ntBASIC20.4■□□□□ 0.86
TM4SF4P48230 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.4■□□□□ 0.86
TM4SF4P48230 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF4P48230 DUX4L27-201ENST00000554796 1261 ntBASIC20.4■□□□□ 0.86
TM4SF4P48230 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.4■□□□□ 0.86
TM4SF4P48230 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.4■□□□□ 0.86
TM4SF4P48230 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.4■□□□□ 0.86
TM4SF4P48230 AC012645.4-201ENST00000610691 1061 ntBASIC20.4■□□□□ 0.86
TM4SF4P48230 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.39■□□□□ 0.86
TM4SF4P48230 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TM4SF4P48230 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.39■□□□□ 0.86
TM4SF4P48230 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.39■□□□□ 0.86
TM4SF4P48230 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
TM4SF4P48230 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TM4SF4P48230 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.39■□□□□ 0.85
TM4SF4P48230 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 INGX-202ENST00000489074 768 ntBASIC20.39■□□□□ 0.85
TM4SF4P48230 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.39■□□□□ 0.85
TM4SF4P48230 AC087641.1-201ENST00000557561 1021 ntBASIC20.39■□□□□ 0.85
TM4SF4P48230 AL353135.1-201ENST00000606729 504 ntBASIC20.39■□□□□ 0.85
TM4SF4P48230 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF4P48230 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF4P48230 SIRPAP1-201ENST00000448467 1770 ntBASIC20.39■□□□□ 0.85
TM4SF4P48230 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 AL499627.1-201ENST00000569373 2188 ntBASIC20.38■□□□□ 0.85
TM4SF4P48230 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TM4SF4P48230 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.38■□□□□ 0.85
TM4SF4P48230 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.38■□□□□ 0.85
TM4SF4P48230 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF4P48230 AC093214.1-201ENST00000511688 1107 ntBASIC20.38■□□□□ 0.85
TM4SF4P48230 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 AC068137.2-201ENST00000605408 478 ntBASIC20.38■□□□□ 0.85
TM4SF4P48230 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TM4SF4P48230 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF4P48230 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF4P48230 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF4P48230 AL158211.5-201ENST00000623583 2518 ntBASIC20.37■□□□□ 0.85
TM4SF4P48230 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF4P48230 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF4P48230 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.37■□□□□ 0.85
TM4SF4P48230 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.37■□□□□ 0.85
TM4SF4P48230 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.37■□□□□ 0.85
TM4SF4P48230 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.37■□□□□ 0.85
TM4SF4P48230 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.37■□□□□ 0.85
TM4SF4P48230 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF4P48230 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF4P48230 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms