Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 KRT18P67-201ENST00000432816 1264 ntBASIC19.1■□□□□ 0.65
BRCC3P46736 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCC3P46736 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.1■□□□□ 0.65
BRCC3P46736 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.1■□□□□ 0.65
BRCC3P46736 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
BRCC3P46736 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.1■□□□□ 0.65
BRCC3P46736 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.1■□□□□ 0.65
BRCC3P46736 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BRCC3P46736 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRCC3P46736 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
BRCC3P46736 AP005117.1-201ENST00000584346 1413 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCC3P46736 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 AL022342.1-201ENST00000400363 863 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 RBM17P3-201ENST00000417687 1192 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 ABCD1P5-201ENST00000445663 754 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.09■□□□□ 0.65
BRCC3P46736 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 AP001005.1-201ENST00000571755 1248 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 AL773604.1-201ENST00000617417 272 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 AC010460.3-201ENST00000511359 1579 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.09■□□□□ 0.65
BRCC3P46736 AL138781.2-201ENST00000617896 1843 ntBASIC19.09■□□□□ 0.65
BRCC3P46736 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.09■□□□□ 0.65
BRCC3P46736 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRCC3P46736 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
BRCC3P46736 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
BRCC3P46736 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
BRCC3P46736 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.08■□□□□ 0.65
BRCC3P46736 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRCC3P46736 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.08■□□□□ 0.64
BRCC3P46736 AL031284.1-201ENST00000419297 478 ntBASIC19.08■□□□□ 0.64
BRCC3P46736 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.08■□□□□ 0.64
BRCC3P46736 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.08■□□□□ 0.64
BRCC3P46736 DUTP2-201ENST00000519164 463 ntBASIC19.08■□□□□ 0.64
BRCC3P46736 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.08■□□□□ 0.64
BRCC3P46736 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BRCC3P46736 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.08■□□□□ 0.64
BRCC3P46736 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.64
BRCC3P46736 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRCC3P46736 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.08■□□□□ 0.64
BRCC3P46736 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.08■□□□□ 0.64
BRCC3P46736 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 AC097374.2-201ENST00000618617 1306 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.07■□□□□ 0.64
BRCC3P46736 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms