Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHKAP35790 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.01■□□□□ 0.63
CHKAP35790 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHKAP35790 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHKAP35790 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHKAP35790 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19■□□□□ 0.63
CHKAP35790 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CHKAP35790 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CHKAP35790 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CHKAP35790 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19■□□□□ 0.63
CHKAP35790 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 TSSC2-201ENST00000450217 709 ntBASIC19■□□□□ 0.63
CHKAP35790 AP003733.1-201ENST00000491725 852 ntBASIC19■□□□□ 0.63
CHKAP35790 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19■□□□□ 0.63
CHKAP35790 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHKAP35790 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHKAP35790 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19■□□□□ 0.63
CHKAP35790 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHKAP35790 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19■□□□□ 0.63
CHKAP35790 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.99■□□□□ 0.63
CHKAP35790 GNAS-203ENST00000306120 1878 ntBASIC18.99■□□□□ 0.63
CHKAP35790 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.99■□□□□ 0.63
CHKAP35790 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHKAP35790 AC016734.2-201ENST00000624325 1377 ntBASIC18.99■□□□□ 0.63
CHKAP35790 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHKAP35790 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 TSPY22P-201ENST00000427496 604 ntBASIC18.99■□□□□ 0.63
CHKAP35790 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.99■□□□□ 0.63
CHKAP35790 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CHKAP35790 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.99■□□□□ 0.63
CHKAP35790 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.99■□□□□ 0.63
CHKAP35790 AC024563.2-201ENST00000603282 481 ntBASIC18.99■□□□□ 0.63
CHKAP35790 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHKAP35790 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHKAP35790 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.99■□□□□ 0.63
CHKAP35790 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.99■□□□□ 0.63
CHKAP35790 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.98■□□□□ 0.63
CHKAP35790 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 NPAP1P7-201ENST00000613027 823 ntBASIC18.98■□□□□ 0.63
CHKAP35790 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHKAP35790 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CHKAP35790 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.98■□□□□ 0.63
CHKAP35790 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHKAP35790 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHKAP35790 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms