Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCK1P35558 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.97■□□□□ 0.63
PCK1P35558 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.97■□□□□ 0.63
PCK1P35558 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.97■□□□□ 0.63
PCK1P35558 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCK1P35558 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCK1P35558 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCK1P35558 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PCK1P35558 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.96■□□□□ 0.63
PCK1P35558 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 AL441883.1-201ENST00000566170 1045 ntBASIC18.96■□□□□ 0.63
PCK1P35558 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.96■□□□□ 0.63
PCK1P35558 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.96■□□□□ 0.63
PCK1P35558 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCK1P35558 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCK1P35558 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
PCK1P35558 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 AC211429.1-201ENST00000415277 523 ntBASIC18.95■□□□□ 0.62
PCK1P35558 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 RASA4DP-201ENST00000460726 1199 ntBASIC18.95■□□□□ 0.62
PCK1P35558 DUTP2-201ENST00000519164 463 ntBASIC18.95■□□□□ 0.62
PCK1P35558 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.95■□□□□ 0.62
PCK1P35558 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.95■□□□□ 0.62
PCK1P35558 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.95■□□□□ 0.62
PCK1P35558 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 AC139713.2-201ENST00000641328 2723 ntBASIC18.95■□□□□ 0.62
PCK1P35558 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.95■□□□□ 0.62
PCK1P35558 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.95■□□□□ 0.62
PCK1P35558 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCK1P35558 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCK1P35558 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.94■□□□□ 0.62
PCK1P35558 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCK1P35558 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.94■□□□□ 0.62
PCK1P35558 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCK1P35558 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCK1P35558 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCK1P35558 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.94■□□□□ 0.62
PCK1P35558 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.94■□□□□ 0.62
PCK1P35558 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.94■□□□□ 0.62
PCK1P35558 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PCK1P35558 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms