Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 AL512604.3-201ENST00000569583 964 ntBASIC19.7■□□□□ 0.74
KRT9P35527 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.7■□□□□ 0.74
KRT9P35527 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.7■□□□□ 0.74
KRT9P35527 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 KRT18P22-201ENST00000402024 1347 ntBASIC19.7■□□□□ 0.74
KRT9P35527 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KRT9P35527 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
KRT9P35527 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.69■□□□□ 0.74
KRT9P35527 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 HMGA1P5-201ENST00000412453 271 ntBASIC19.69■□□□□ 0.74
KRT9P35527 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.69■□□□□ 0.74
KRT9P35527 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.69■□□□□ 0.74
KRT9P35527 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
KRT9P35527 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
KRT9P35527 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT9P35527 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT9P35527 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KRT9P35527 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KRT9P35527 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT9P35527 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.69■□□□□ 0.74
KRT9P35527 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KRT9P35527 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.69■□□□□ 0.74
KRT9P35527 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
KRT9P35527 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.68■□□□□ 0.74
KRT9P35527 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 AC087499.1-201ENST00000418141 1075 ntBASIC19.68■□□□□ 0.74
KRT9P35527 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.68■□□□□ 0.74
KRT9P35527 FAM87A-204ENST00000613235 858 ntBASIC19.68■□□□□ 0.74
KRT9P35527 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 AL024508.2-201ENST00000607749 1894 ntBASIC19.68■□□□□ 0.74
KRT9P35527 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.68■□□□□ 0.74
KRT9P35527 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KRT9P35527 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KRT9P35527 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT9P35527 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.67■□□□□ 0.74
KRT9P35527 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KRT9P35527 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.67■□□□□ 0.74
KRT9P35527 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KRT9P35527 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.67■□□□□ 0.74
KRT9P35527 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms