Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.22■□□□□ 0.51
RPA3P35244 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.22■□□□□ 0.51
RPA3P35244 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RPA3P35244 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RPA3P35244 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RPA3P35244 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPA3P35244 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPA3P35244 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
RPA3P35244 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.22■□□□□ 0.51
RPA3P35244 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPA3P35244 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.22■□□□□ 0.51
RPA3P35244 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.21■□□□□ 0.51
RPA3P35244 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 NKILA-202ENST00000614771 2598 ntBASIC18.21■□□□□ 0.51
RPA3P35244 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.21■□□□□ 0.51
RPA3P35244 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.21■□□□□ 0.51
RPA3P35244 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RPA3P35244 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 AL353719.1-201ENST00000566847 864 ntBASIC18.21■□□□□ 0.51
RPA3P35244 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 AL023803.3-201ENST00000615559 522 ntBASIC18.21■□□□□ 0.51
RPA3P35244 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RPA3P35244 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.21■□□□□ 0.51
RPA3P35244 AC011676.5-201ENST00000624864 2660 ntBASIC18.21■□□□□ 0.51
RPA3P35244 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.21■□□□□ 0.51
RPA3P35244 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPA3P35244 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.21■□□□□ 0.51
RPA3P35244 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RPA3P35244 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 LINC00602-201ENST00000629776 2065 ntBASIC18.2■□□□□ 0.5
RPA3P35244 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
RPA3P35244 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.2■□□□□ 0.5
RPA3P35244 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 AC133561.5-201ENST00000635547 218 ntBASIC18.2■□□□□ 0.5
RPA3P35244 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.2■□□□□ 0.5
RPA3P35244 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.2■□□□□ 0.5
RPA3P35244 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPA3P35244 AC034236.2-201ENST00000606662 1610 ntBASIC18.2■□□□□ 0.5
RPA3P35244 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RPA3P35244 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RPA3P35244 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPA3P35244 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms