Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19■□□□□ 0.63
CHRNA3P32297 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19■□□□□ 0.63
CHRNA3P32297 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHRNA3P32297 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19■□□□□ 0.63
CHRNA3P32297 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CHRNA3P32297 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA3P32297 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA3P32297 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 AC036111.1-201ENST00000533973 1582 ntBASIC18.99■□□□□ 0.63
CHRNA3P32297 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA3P32297 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA3P32297 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA3P32297 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA3P32297 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.99■□□□□ 0.63
CHRNA3P32297 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRNA3P32297 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 MIR3180-5-201ENST00000583743 153 ntBASIC18.99■□□□□ 0.63
CHRNA3P32297 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHRNA3P32297 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNA3P32297 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNA3P32297 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
CHRNA3P32297 AL163051.1-201ENST00000569214 1512 ntBASIC18.99■□□□□ 0.63
CHRNA3P32297 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHRNA3P32297 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA3P32297 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA3P32297 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA3P32297 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 AC009102.3-201ENST00000623118 1491 ntBASIC18.98■□□□□ 0.63
CHRNA3P32297 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHRNA3P32297 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.98■□□□□ 0.63
CHRNA3P32297 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRNA3P32297 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHRNA3P32297 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRNA3P32297 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRNA3P32297 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.97■□□□□ 0.63
CHRNA3P32297 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 KRT18P55-202ENST00000578578 1546 ntBASIC18.97■□□□□ 0.63
CHRNA3P32297 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 MIR149-201ENST00000384879 89 ntBASIC18.97■□□□□ 0.63
CHRNA3P32297 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 GCSHP2-201ENST00000560971 527 ntBASIC18.97■□□□□ 0.63
CHRNA3P32297 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CHRNA3P32297 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.97■□□□□ 0.63
CHRNA3P32297 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHRNA3P32297 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.97■□□□□ 0.63
CHRNA3P32297 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.97■□□□□ 0.63
CHRNA3P32297 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms