Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 POM121L3P-201ENST00000419331 1163 ntBASIC15.19■□□□□ 0.02
COL8A2P25067 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.19■□□□□ 0.02
COL8A2P25067 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.19■□□□□ 0.02
COL8A2P25067 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.19■□□□□ 0.02
COL8A2P25067 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL8A2P25067 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COL8A2P25067 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 AC073592.3-201ENST00000625118 1834 ntBASIC15.18■□□□□ 0.02
COL8A2P25067 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
COL8A2P25067 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
COL8A2P25067 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.18■□□□□ 0.02
COL8A2P25067 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.18■□□□□ 0.02
COL8A2P25067 AC005336.2-201ENST00000593183 939 ntBASIC15.18■□□□□ 0.02
COL8A2P25067 BNIP3P18-201ENST00000593976 575 ntBASIC15.18■□□□□ 0.02
COL8A2P25067 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.18■□□□□ 0.02
COL8A2P25067 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COL8A2P25067 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
COL8A2P25067 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.18■□□□□ 0.02
COL8A2P25067 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.18■□□□□ 0.02
COL8A2P25067 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
COL8A2P25067 WIZP1-201ENST00000531444 2299 ntBASIC15.18■□□□□ 0.02
COL8A2P25067 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COL8A2P25067 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
COL8A2P25067 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.17■□□□□ 0.02
COL8A2P25067 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COL8A2P25067 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.17■□□□□ 0.02
COL8A2P25067 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.17■□□□□ 0.02
COL8A2P25067 KRT18P65-201ENST00000439811 1286 ntBASIC15.17■□□□□ 0.02
COL8A2P25067 FAAHP1-202ENST00000446499 1238 ntBASIC15.17■□□□□ 0.02
COL8A2P25067 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
COL8A2P25067 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 MIR5100-201ENST00000579544 119 ntBASIC15.17■□□□□ 0.02
COL8A2P25067 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.17■□□□□ 0.02
COL8A2P25067 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COL8A2P25067 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.17■□□□□ 0.02
COL8A2P25067 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms