Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
MMP8P22894 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP8P22894 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP8P22894 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP8P22894 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP8P22894 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP8P22894 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP8P22894 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP8P22894 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP8P22894 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MMP8P22894 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP8P22894 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
MMP8P22894 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP8P22894 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MMP8P22894 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MMP8P22894 Z83836.1-201ENST00000624605 1642 ntBASIC18.92■□□□□ 0.62
MMP8P22894 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP8P22894 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MMP8P22894 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.92■□□□□ 0.62
MMP8P22894 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.92■□□□□ 0.62
MMP8P22894 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MMP8P22894 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP8P22894 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.92■□□□□ 0.62
MMP8P22894 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.92■□□□□ 0.62
MMP8P22894 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.92■□□□□ 0.62
MMP8P22894 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MMP8P22894 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP8P22894 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
MMP8P22894 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP8P22894 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP8P22894 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MMP8P22894 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP8P22894 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP8P22894 FAM210CP-201ENST00000445714 574 ntBASIC18.91■□□□□ 0.62
MMP8P22894 AC112698.1-201ENST00000510299 916 ntBASIC18.91■□□□□ 0.62
MMP8P22894 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.91■□□□□ 0.62
MMP8P22894 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.91■□□□□ 0.62
MMP8P22894 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MMP8P22894 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.91■□□□□ 0.62
MMP8P22894 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
MMP8P22894 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MMP8P22894 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.91■□□□□ 0.62
MMP8P22894 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MMP8P22894 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 AC009949.1-201ENST00000623048 1830 ntBASIC18.9■□□□□ 0.62
MMP8P22894 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
MMP8P22894 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MMP8P22894 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MMP8P22894 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms