Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX1P22670 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX1P22670 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX1P22670 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX1P22670 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX1P22670 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX1P22670 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RFX1P22670 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFX1P22670 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RFX1P22670 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RFX1P22670 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.6■□□□□ 0.73
RFX1P22670 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RFX1P22670 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.6■□□□□ 0.73
RFX1P22670 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.6■□□□□ 0.73
RFX1P22670 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFX1P22670 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.6■□□□□ 0.73
RFX1P22670 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.6■□□□□ 0.73
RFX1P22670 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
RFX1P22670 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX1P22670 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX1P22670 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 AC099343.3-201ENST00000605834 2503 ntBASIC19.59■□□□□ 0.73
RFX1P22670 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 FDX1P1-201ENST00000449115 551 ntBASIC19.59■□□□□ 0.73
RFX1P22670 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFX1P22670 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX1P22670 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RFX1P22670 AL121672.3-201ENST00000608644 468 ntBASIC19.59■□□□□ 0.73
RFX1P22670 NPAP1P7-201ENST00000613027 823 ntBASIC19.59■□□□□ 0.73
RFX1P22670 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFX1P22670 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RFX1P22670 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX1P22670 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.58■□□□□ 0.73
RFX1P22670 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RFX1P22670 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.58■□□□□ 0.73
RFX1P22670 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.58■□□□□ 0.73
RFX1P22670 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX1P22670 KRT18P55-202ENST00000578578 1546 ntBASIC19.58■□□□□ 0.73
RFX1P22670 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.58■□□□□ 0.72
RFX1P22670 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 PVRIG2P-201ENST00000435460 978 ntBASIC19.58■□□□□ 0.72
RFX1P22670 TSSC2-201ENST00000450217 709 ntBASIC19.58■□□□□ 0.72
RFX1P22670 DUTP2-201ENST00000519164 463 ntBASIC19.58■□□□□ 0.72
RFX1P22670 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.58■□□□□ 0.72
RFX1P22670 LINC01711-201ENST00000598340 967 ntBASIC19.58■□□□□ 0.72
RFX1P22670 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 HYMAI.1-201ENST00000620949 238 ntBASIC19.58■□□□□ 0.72
RFX1P22670 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RFX1P22670 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RFX1P22670 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX1P22670 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX1P22670 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
RFX1P22670 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX1P22670 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX1P22670 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms