Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
HOXD8P13378 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXD8P13378 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXD8P13378 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HOXD8P13378 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD8P13378 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD8P13378 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD8P13378 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD8P13378 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXD8P13378 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD8P13378 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HOXD8P13378 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXD8P13378 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 MED15P5-201ENST00000423150 992 ntBASIC19.74■□□□□ 0.75
HOXD8P13378 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HOXD8P13378 AC009947.1-201ENST00000444350 727 ntBASIC19.74■□□□□ 0.75
HOXD8P13378 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXD8P13378 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXD8P13378 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 AC006557.2-201ENST00000592985 1240 ntBASIC19.74■□□□□ 0.75
HOXD8P13378 AL356488.2-201ENST00000602755 427 ntBASIC19.74■□□□□ 0.75
HOXD8P13378 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
HOXD8P13378 AC132938.5-201ENST00000624980 1813 ntBASIC19.74■□□□□ 0.75
HOXD8P13378 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD8P13378 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 AC004817.3-201ENST00000602957 2129 ntBASIC19.73■□□□□ 0.75
HOXD8P13378 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
HOXD8P13378 MIR940-201ENST00000401276 94 ntBASIC19.73■□□□□ 0.75
HOXD8P13378 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD8P13378 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXD8P13378 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXD8P13378 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXD8P13378 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.73■□□□□ 0.75
HOXD8P13378 AC019129.2-201ENST00000609837 1235 ntBASIC19.73■□□□□ 0.75
HOXD8P13378 AL589182.2-201ENST00000619332 1049 ntBASIC19.73■□□□□ 0.75
HOXD8P13378 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXD8P13378 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD8P13378 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXD8P13378 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXD8P13378 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXD8P13378 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXD8P13378 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXD8P13378 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.72■□□□□ 0.75
HOXD8P13378 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXD8P13378 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXD8P13378 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
HOXD8P13378 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 AC092865.5-201ENST00000545435 363 ntBASIC19.72■□□□□ 0.75
HOXD8P13378 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
HOXD8P13378 BX323043.1-201ENST00000641006 1765 ntBASIC19.72■□□□□ 0.75
HOXD8P13378 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
HOXD8P13378 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD8P13378 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXD8P13378 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms