Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.81■□□□□ 0.28
TPRP12270 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.81■□□□□ 0.28
TPRP12270 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TPRP12270 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.81■□□□□ 0.28
TPRP12270 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TPRP12270 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 IGLL3P-201ENST00000412472 434 ntBASIC16.8■□□□□ 0.28
TPRP12270 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.8■□□□□ 0.28
TPRP12270 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.8■□□□□ 0.28
TPRP12270 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.8■□□□□ 0.28
TPRP12270 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
TPRP12270 AC096734.2-201ENST00000562054 433 ntBASIC16.8■□□□□ 0.28
TPRP12270 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TPRP12270 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.8■□□□□ 0.28
TPRP12270 MIR4538-201ENST00000581377 78 ntBASIC16.8■□□□□ 0.28
TPRP12270 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
TPRP12270 AC068587.10-201ENST00000641210 219 ntBASIC16.8■□□□□ 0.28
TPRP12270 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.8■□□□□ 0.28
TPRP12270 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TPRP12270 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 AL357033.4-201ENST00000617703 1807 ntBASIC16.79■□□□□ 0.28
TPRP12270 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 BCAR1-209ENST00000546196 1340 ntBASIC16.79■□□□□ 0.28
TPRP12270 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.79■□□□□ 0.28
TPRP12270 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 RHOQP3-201ENST00000437982 621 ntBASIC16.79■□□□□ 0.28
TPRP12270 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.79■□□□□ 0.28
TPRP12270 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TPRP12270 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 PMPCAP1-201ENST00000508114 1576 ntBASIC16.79■□□□□ 0.28
TPRP12270 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.79■□□□□ 0.28
TPRP12270 RCC2P3-201ENST00000418112 1537 ntBASIC16.79■□□□□ 0.28
TPRP12270 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TPRP12270 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.79■□□□□ 0.28
TPRP12270 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.78■□□□□ 0.28
TPRP12270 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.78■□□□□ 0.28
TPRP12270 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TPRP12270 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TPRP12270 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TPRP12270 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TPRP12270 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.78■□□□□ 0.28
TPRP12270 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms