Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP2P08253 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP2P08253 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP2P08253 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 AP002383.4-201ENST00000442518 975 ntBASIC18.11■□□□□ 0.49
MMP2P08253 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 GUSBP12-201ENST00000513727 720 ntBASIC18.11■□□□□ 0.49
MMP2P08253 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP2P08253 AC090616.6-201ENST00000582640 721 ntBASIC18.11■□□□□ 0.49
MMP2P08253 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.11■□□□□ 0.49
MMP2P08253 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MMP2P08253 AC124864.1-201ENST00000623408 392 ntBASIC18.11■□□□□ 0.49
MMP2P08253 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP2P08253 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.11■□□□□ 0.49
MMP2P08253 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP2P08253 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP2P08253 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP2P08253 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
MMP2P08253 AC009949.1-201ENST00000623048 1830 ntBASIC18.1■□□□□ 0.49
MMP2P08253 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP2P08253 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
MMP2P08253 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
MMP2P08253 CHCHD2P8-201ENST00000429873 447 ntBASIC18.1■□□□□ 0.49
MMP2P08253 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.1■□□□□ 0.49
MMP2P08253 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.1■□□□□ 0.49
MMP2P08253 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MMP2P08253 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP2P08253 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP2P08253 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MMP2P08253 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 TSSC2-201ENST00000450217 709 ntBASIC18.09■□□□□ 0.49
MMP2P08253 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP2P08253 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.09■□□□□ 0.49
MMP2P08253 AC091076.1-201ENST00000610741 619 ntBASIC18.09■□□□□ 0.49
MMP2P08253 IGHV3-41-201ENST00000613121 348 ntBASIC18.09■□□□□ 0.49
MMP2P08253 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP2P08253 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
MMP2P08253 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP2P08253 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP2P08253 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP2P08253 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
MMP2P08253 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MMP2P08253 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 386.5 ms