Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AC079776.2-201ENST00000641154 1609 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
COL1A2P08123 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 AC135776.1-201ENST00000319817 2481 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.67■□□□□ 0.74
COL1A2P08123 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.67■□□□□ 0.74
COL1A2P08123 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 AC139887.3-201ENST00000568585 713 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.67■□□□□ 0.74
COL1A2P08123 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 AC073592.4-201ENST00000623827 446 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.67■□□□□ 0.74
COL1A2P08123 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.67■□□□□ 0.74
COL1A2P08123 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COL1A2P08123 AC243591.1-201ENST00000452967 1364 ntBASIC19.66■□□□□ 0.74
COL1A2P08123 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.66■□□□□ 0.74
COL1A2P08123 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.66■□□□□ 0.74
COL1A2P08123 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.66■□□□□ 0.74
COL1A2P08123 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
COL1A2P08123 NKAPP1-205ENST00000585790 367 ntBASIC19.66■□□□□ 0.74
COL1A2P08123 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
COL1A2P08123 AC025062.2-201ENST00000605477 670 ntBASIC19.66■□□□□ 0.74
COL1A2P08123 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL1A2P08123 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
COL1A2P08123 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL1A2P08123 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.66■□□□□ 0.74
COL1A2P08123 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL1A2P08123 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL1A2P08123 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL1A2P08123 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
COL1A2P08123 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL1A2P08123 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL1A2P08123 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.65■□□□□ 0.74
COL1A2P08123 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.65■□□□□ 0.74
COL1A2P08123 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL1A2P08123 AL049840.3-201ENST00000602669 611 ntBASIC19.65■□□□□ 0.74
COL1A2P08123 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL1A2P08123 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 SIGLEC16-201ENST00000599858 1437 ntBASIC19.65■□□□□ 0.74
COL1A2P08123 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A2P08123 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A2P08123 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A2P08123 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A2P08123 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
COL1A2P08123 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A2P08123 DDX43P3-201ENST00000441064 443 ntBASIC19.64■□□□□ 0.73
COL1A2P08123 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A2P08123 OR7E14P-202ENST00000530490 1290 ntBASIC19.64■□□□□ 0.73
COL1A2P08123 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.64■□□□□ 0.73
COL1A2P08123 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms