Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 AL024508.2-201ENST00000607749 1894 ntBASIC16.33■□□□□ 0.2
HMGN1P05114 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGN1P05114 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGN1P05114 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGN1P05114 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.32■□□□□ 0.2
HMGN1P05114 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGN1P05114 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGN1P05114 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGN1P05114 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGN1P05114 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGN1P05114 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGN1P05114 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 AC022898.2-201ENST00000616822 1312 ntBASIC16.32■□□□□ 0.2
HMGN1P05114 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGN1P05114 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HMGN1P05114 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HMGN1P05114 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HMGN1P05114 PP12613-201ENST00000424958 2230 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HMGN1P05114 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGN1P05114 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 AL138688.1-201ENST00000624851 1594 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 SLC25A1P2-201ENST00000430693 912 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.31■□□□□ 0.2
HMGN1P05114 CD99P1-205ENST00000527459 561 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGN1P05114 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.31■□□□□ 0.2
HMGN1P05114 AP005242.2-201ENST00000580065 1175 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 AC112497.1-201ENST00000624824 639 ntBASIC16.31■□□□□ 0.2
HMGN1P05114 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGN1P05114 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGN1P05114 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGN1P05114 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGN1P05114 AC133963.1-201ENST00000504166 1679 ntBASIC16.3■□□□□ 0.2
HMGN1P05114 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMGN1P05114 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMGN1P05114 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGN1P05114 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HMGN1P05114 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMGN1P05114 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.3■□□□□ 0.2
HMGN1P05114 AL353719.1-201ENST00000566847 864 ntBASIC16.3■□□□□ 0.2
HMGN1P05114 CR769767.2-201ENST00000622735 460 ntBASIC16.3■□□□□ 0.2
HMGN1P05114 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.3■□□□□ 0.2
HMGN1P05114 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HMGN1P05114 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
HMGN1P05114 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMGN1P05114 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms