Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KRT6AP02538 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 ECEL1P3-201ENST00000427961 737 ntBASIC17.47■□□□□ 0.39
KRT6AP02538 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.47■□□□□ 0.39
KRT6AP02538 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT6AP02538 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KRT6AP02538 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KRT6AP02538 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KRT6AP02538 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT6AP02538 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT6AP02538 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KRT6AP02538 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT6AP02538 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT6AP02538 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT6AP02538 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT6AP02538 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KRT6AP02538 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KRT6AP02538 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT6AP02538 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
KRT6AP02538 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT6AP02538 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KRT6AP02538 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
KRT6AP02538 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT6AP02538 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 AC012317.2-201ENST00000623305 2251 ntBASIC17.45■□□□□ 0.38
KRT6AP02538 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KRT6AP02538 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT6AP02538 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 PVRIG2P-201ENST00000435460 978 ntBASIC17.45■□□□□ 0.38
KRT6AP02538 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT6AP02538 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms