Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 GGTLC5P-201ENST00000617623 998 ntBASIC20.43■□□□□ 0.86
ALDH1A1P00352 AC091812.2-201ENST00000619081 385 ntBASIC20.43■□□□□ 0.86
ALDH1A1P00352 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALDH1A1P00352 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.43■□□□□ 0.86
ALDH1A1P00352 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.42■□□□□ 0.86
ALDH1A1P00352 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 AC069262.1-201ENST00000539058 672 ntBASIC20.42■□□□□ 0.86
ALDH1A1P00352 AC023141.13-201ENST00000604991 943 ntBASIC20.42■□□□□ 0.86
ALDH1A1P00352 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 AL035252.4-201ENST00000624174 288 ntBASIC20.42■□□□□ 0.86
ALDH1A1P00352 Z92544.3-201ENST00000624747 417 ntBASIC20.42■□□□□ 0.86
ALDH1A1P00352 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.42■□□□□ 0.86
ALDH1A1P00352 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ALDH1A1P00352 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.41■□□□□ 0.86
ALDH1A1P00352 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 SIGLEC30P-201ENST00000455569 941 ntBASIC20.41■□□□□ 0.86
ALDH1A1P00352 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 AC025580.3-201ENST00000617932 1424 ntBASIC20.41■□□□□ 0.86
ALDH1A1P00352 AL353593.2-201ENST00000602529 1483 ntBASIC20.41■□□□□ 0.86
ALDH1A1P00352 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ALDH1A1P00352 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 AC125437.2-201ENST00000625180 2167 ntBASIC20.41■□□□□ 0.86
ALDH1A1P00352 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.41■□□□□ 0.86
ALDH1A1P00352 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALDH1A1P00352 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ALDH1A1P00352 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 COX5BP2-201ENST00000392354 334 ntBASIC20.4■□□□□ 0.86
ALDH1A1P00352 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 PMS2P4-201ENST00000412466 1052 ntBASIC20.4■□□□□ 0.86
ALDH1A1P00352 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ALDH1A1P00352 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALDH1A1P00352 AC023141.5-201ENST00000458585 616 ntBASIC20.4■□□□□ 0.86
ALDH1A1P00352 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 AC015911.4-201ENST00000588022 1070 ntBASIC20.4■□□□□ 0.86
ALDH1A1P00352 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 LINC00628-201ENST00000628516 1289 ntBASIC20.4■□□□□ 0.86
ALDH1A1P00352 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.4■□□□□ 0.86
ALDH1A1P00352 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALDH1A1P00352 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.39■□□□□ 0.86
ALDH1A1P00352 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ALDH1A1P00352 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ALDH1A1P00352 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ALDH1A1P00352 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms