Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A2O94788 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A2O94788 AL160237.2-201ENST00000556165 472 ntBASIC18.69■□□□□ 0.58
ALDH1A2O94788 AC074051.2-201ENST00000565115 352 ntBASIC18.69■□□□□ 0.58
ALDH1A2O94788 GPR32P1-201ENST00000601788 811 ntBASIC18.69■□□□□ 0.58
ALDH1A2O94788 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ALDH1A2O94788 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A2O94788 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 VENTXP7-201ENST00000475503 772 ntBASIC18.68■□□□□ 0.58
ALDH1A2O94788 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 GUSBP12-201ENST00000513727 720 ntBASIC18.68■□□□□ 0.58
ALDH1A2O94788 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 AL031008.1-201ENST00000619963 541 ntBASIC18.68■□□□□ 0.58
ALDH1A2O94788 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A2O94788 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A2O94788 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A2O94788 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A2O94788 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 ESPNP-201ENST00000270691 2015 ntBASIC18.66■□□□□ 0.58
ALDH1A2O94788 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 AC024563.2-201ENST00000603282 481 ntBASIC18.66■□□□□ 0.58
ALDH1A2O94788 AC138894.3-201ENST00000603787 634 ntBASIC18.66■□□□□ 0.58
ALDH1A2O94788 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A2O94788 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A2O94788 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms