Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC006011.2-201ENST00000621313 1158 ntBASIC17.98■□□□□ 0.47
NDUFS3O75489 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS3O75489 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NDUFS3O75489 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS3O75489 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NDUFS3O75489 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS3O75489 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFS3O75489 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 LINC00602-201ENST00000629776 2065 ntBASIC17.97■□□□□ 0.47
NDUFS3O75489 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NDUFS3O75489 AC092647.4-201ENST00000457211 535 ntBASIC17.97■□□□□ 0.47
NDUFS3O75489 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.97■□□□□ 0.47
NDUFS3O75489 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.97■□□□□ 0.47
NDUFS3O75489 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.97■□□□□ 0.47
NDUFS3O75489 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NDUFS3O75489 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.97■□□□□ 0.47
NDUFS3O75489 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NDUFS3O75489 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NDUFS3O75489 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NDUFS3O75489 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NDUFS3O75489 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
NDUFS3O75489 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
NDUFS3O75489 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.96■□□□□ 0.47
NDUFS3O75489 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 KRT18P48-201ENST00000434763 852 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.96■□□□□ 0.47
NDUFS3O75489 AL359075.1-203ENST00000462729 1002 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 AC113404.2-201ENST00000507884 177 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 DUTP2-201ENST00000519164 463 ntBASIC17.96■□□□□ 0.47
NDUFS3O75489 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.96■□□□□ 0.47
NDUFS3O75489 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.96■□□□□ 0.47
NDUFS3O75489 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
NDUFS3O75489 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.96■□□□□ 0.47
NDUFS3O75489 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.96■□□□□ 0.47
NDUFS3O75489 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NDUFS3O75489 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFS3O75489 AC022898.2-201ENST00000616822 1312 ntBASIC17.96■□□□□ 0.46
NDUFS3O75489 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
NDUFS3O75489 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
NDUFS3O75489 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
NDUFS3O75489 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.96■□□□□ 0.46
NDUFS3O75489 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.95■□□□□ 0.46
NDUFS3O75489 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 KRT89P-201ENST00000620027 1478 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
NDUFS3O75489 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NDUFS3O75489 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 KRT18P55-202ENST00000578578 1546 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NDUFS3O75489 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFS3O75489 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
NDUFS3O75489 HLA-F-220ENST00000434407 884 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 AC104076.2-201ENST00000448912 469 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 AC092597.1-201ENST00000487352 616 ntBASIC17.95■□□□□ 0.46
NDUFS3O75489 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms