Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 AC010240.3-201ENST00000607688 395 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 AC069148.1-201ENST00000608741 768 ntBASIC17.49■□□□□ 0.39
CNOT3O75175 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNOT3O75175 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.49■□□□□ 0.39
CNOT3O75175 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
CNOT3O75175 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNOT3O75175 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNOT3O75175 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNOT3O75175 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.49■□□□□ 0.39
CNOT3O75175 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.48■□□□□ 0.39
CNOT3O75175 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNOT3O75175 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT3O75175 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.48■□□□□ 0.39
CNOT3O75175 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNOT3O75175 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.48■□□□□ 0.39
CNOT3O75175 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.48■□□□□ 0.39
CNOT3O75175 AL391807.1-203ENST00000604392 2365 ntBASIC17.48■□□□□ 0.39
CNOT3O75175 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNOT3O75175 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNOT3O75175 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.47■□□□□ 0.39
CNOT3O75175 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CNOT3O75175 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 AL136038.4-201ENST00000603606 1261 ntBASIC17.47■□□□□ 0.39
CNOT3O75175 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.47■□□□□ 0.39
CNOT3O75175 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNOT3O75175 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNOT3O75175 KRT8P7-201ENST00000533003 1432 ntBASIC17.47■□□□□ 0.39
CNOT3O75175 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.46■□□□□ 0.39
CNOT3O75175 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.46■□□□□ 0.39
CNOT3O75175 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 NPAP1P7-201ENST00000613027 823 ntBASIC17.46■□□□□ 0.39
CNOT3O75175 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CNOT3O75175 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CNOT3O75175 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNOT3O75175 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.46■□□□□ 0.39
CNOT3O75175 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms