Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNCRIPO60506 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNCRIPO60506 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
SYNCRIPO60506 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNCRIPO60506 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYNCRIPO60506 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.41■□□□□ 0.54
SYNCRIPO60506 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYNCRIPO60506 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 AC091607.1-201ENST00000490318 1060 ntBASIC18.4■□□□□ 0.54
SYNCRIPO60506 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 SDHAP2-201ENST00000455183 2001 ntBASIC18.4■□□□□ 0.54
SYNCRIPO60506 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SYNCRIPO60506 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNCRIPO60506 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SYNCRIPO60506 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
SYNCRIPO60506 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.39■□□□□ 0.54
SYNCRIPO60506 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.39■□□□□ 0.54
SYNCRIPO60506 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SYNCRIPO60506 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 AC079781.3-201ENST00000449110 356 ntBASIC18.39■□□□□ 0.53
SYNCRIPO60506 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 AC009078.2-202ENST00000463353 338 ntBASIC18.39■□□□□ 0.53
SYNCRIPO60506 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SYNCRIPO60506 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNCRIPO60506 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 AC090164.3-201ENST00000610780 2143 ntBASIC18.38■□□□□ 0.53
SYNCRIPO60506 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 AC104692.2-201ENST00000603054 253 ntBASIC18.38■□□□□ 0.53
SYNCRIPO60506 AL121912.1-201ENST00000603683 238 ntBASIC18.38■□□□□ 0.53
SYNCRIPO60506 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNCRIPO60506 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNCRIPO60506 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms