Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 KRT18P65-201ENST00000439811 1286 ntBASIC16.06■□□□□ 0.16
TRAF3IP2O43734 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.06■□□□□ 0.16
TRAF3IP2O43734 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAF3IP2O43734 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 RNF126P1-202ENST00000569893 925 ntBASIC16.05■□□□□ 0.16
TRAF3IP2O43734 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 GPR32P1-201ENST00000601788 811 ntBASIC16.05■□□□□ 0.16
TRAF3IP2O43734 AL390719.2-201ENST00000606993 987 ntBASIC16.05■□□□□ 0.16
TRAF3IP2O43734 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAF3IP2O43734 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AL353692.3-201ENST00000407031 1396 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AL031133.1-201ENST00000406807 723 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AL645929.1-201ENST00000420084 975 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AC005332.3-201ENST00000589904 676 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 NTF6B-201ENST00000591913 560 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AC100803.2-201ENST00000562459 1963 ntBASIC16.04■□□□□ 0.16
TRAF3IP2O43734 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAF3IP2O43734 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 AC022898.2-201ENST00000616822 1312 ntBASIC16.03■□□□□ 0.16
TRAF3IP2O43734 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP2O43734 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms