Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SURF4O15260 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 AP001094.4-201ENST00000579008 2176 ntBASIC16.27■□□□□ 0.2
SURF4O15260 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.27■□□□□ 0.2
SURF4O15260 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.27■□□□□ 0.2
SURF4O15260 AL138688.1-201ENST00000624851 1594 ntBASIC16.27■□□□□ 0.2
SURF4O15260 LINC00602-201ENST00000629776 2065 ntBASIC16.27■□□□□ 0.2
SURF4O15260 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.27■□□□□ 0.2
SURF4O15260 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.27■□□□□ 0.2
SURF4O15260 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.27■□□□□ 0.2
SURF4O15260 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.27■□□□□ 0.2
SURF4O15260 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.27■□□□□ 0.2
SURF4O15260 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.27■□□□□ 0.2
SURF4O15260 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.27■□□□□ 0.2
SURF4O15260 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.27■□□□□ 0.2
SURF4O15260 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.27■□□□□ 0.2
SURF4O15260 AL353719.1-201ENST00000566847 864 ntBASIC16.27■□□□□ 0.2
SURF4O15260 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.27■□□□□ 0.2
SURF4O15260 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 AD000864.1-201ENST00000624076 2295 ntBASIC16.27■□□□□ 0.2
SURF4O15260 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SURF4O15260 AC100803.2-201ENST00000562459 1963 ntBASIC16.27■□□□□ 0.19
SURF4O15260 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.27■□□□□ 0.19
SURF4O15260 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.27■□□□□ 0.19
SURF4O15260 AC133963.1-201ENST00000504166 1679 ntBASIC16.27■□□□□ 0.19
SURF4O15260 AC132938.6-201ENST00000623828 1655 ntBASIC16.27■□□□□ 0.19
SURF4O15260 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SURF4O15260 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 SLC25A1P2-201ENST00000430693 912 ntBASIC16.26■□□□□ 0.19
SURF4O15260 TSPY17P-201ENST00000450329 467 ntBASIC16.26■□□□□ 0.19
SURF4O15260 RBM17P1-201ENST00000453646 1190 ntBASIC16.26■□□□□ 0.19
SURF4O15260 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.26■□□□□ 0.19
SURF4O15260 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 AC112497.1-201ENST00000624824 639 ntBASIC16.26■□□□□ 0.19
SURF4O15260 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SURF4O15260 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SURF4O15260 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SURF4O15260 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SURF4O15260 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SURF4O15260 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.25■□□□□ 0.19
SURF4O15260 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.25■□□□□ 0.19
SURF4O15260 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 AL355075.4-201ENST00000554988 638 ntBASIC16.25■□□□□ 0.19
SURF4O15260 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SURF4O15260 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SURF4O15260 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SURF4O15260 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.25■□□□□ 0.19
SURF4O15260 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
SURF4O15260 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms