Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SPDYE8P-202ENST00000612377 668 ntBASIC28.89■■■□□ 2.22
CHD1O14646 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC28.89■■■□□ 2.22
CHD1O14646 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC28.89■■■□□ 2.22
CHD1O14646 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 FO538757.1-201ENST00000623083 1397 ntBASIC28.89■■■□□ 2.22
CHD1O14646 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC28.89■■■□□ 2.22
CHD1O14646 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.21
CHD1O14646 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC28.89■■■□□ 2.21
CHD1O14646 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC28.89■■■□□ 2.21
CHD1O14646 AC125807.1-201ENST00000483097 614 ntBASIC28.89■■■□□ 2.21
CHD1O14646 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC28.89■■■□□ 2.21
CHD1O14646 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC28.89■■■□□ 2.21
CHD1O14646 AC010336.2-201ENST00000564226 506 ntBASIC28.89■■■□□ 2.21
CHD1O14646 AC140878.1-201ENST00000565277 250 ntBASIC28.89■■■□□ 2.21
CHD1O14646 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC28.89■■■□□ 2.21
CHD1O14646 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD1O14646 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD1O14646 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
CHD1O14646 BAD-207ENST00000544785 525 ntTSL 3 BASIC28.88■■■□□ 2.21
CHD1O14646 COQ9-214ENST00000567933 882 ntTSL 3 BASIC28.88■■■□□ 2.21
CHD1O14646 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD1O14646 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CHD1O14646 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC28.88■■■□□ 2.21
CHD1O14646 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
CHD1O14646 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC28.87■■■□□ 2.21
CHD1O14646 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
CHD1O14646 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 MIR943-201ENST00000401286 94 ntBASIC28.87■■■□□ 2.21
CHD1O14646 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC28.87■■■□□ 2.21
CHD1O14646 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 CXCL1P1-201ENST00000502804 216 ntBASIC28.87■■■□□ 2.21
CHD1O14646 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC28.87■■■□□ 2.21
CHD1O14646 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CHD1O14646 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CHD1O14646 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
CHD1O14646 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHD1O14646 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC28.87■■■□□ 2.21
CHD1O14646 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
CHD1O14646 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC28.86■■■□□ 2.21
CHD1O14646 ATP5G2P4-201ENST00000442175 420 ntBASIC28.86■■■□□ 2.21
CHD1O14646 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC28.86■■■□□ 2.21
CHD1O14646 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
CHD1O14646 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CHD1O14646 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
CHD1O14646 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
CHD1O14646 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC28.86■■■□□ 2.21
CHD1O14646 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CHD1O14646 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC28.86■■■□□ 2.21
CHD1O14646 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 AC112907.3-201ENST00000577781 2400 ntBASIC28.85■■■□□ 2.21
CHD1O14646 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
CHD1O14646 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CHD1O14646 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC28.85■■■□□ 2.21
CHD1O14646 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC28.85■■■□□ 2.21
CHD1O14646 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC28.85■■■□□ 2.21
CHD1O14646 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC28.85■■■□□ 2.21
CHD1O14646 AC026120.1-201ENST00000611536 926 ntBASIC28.85■■■□□ 2.21
CHD1O14646 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CHD1O14646 TDG-209ENST00000544861 1387 ntTSL 2 BASIC28.85■■■□□ 2.21
CHD1O14646 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC28.84■■■□□ 2.21
CHD1O14646 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC28.84■■■□□ 2.21
CHD1O14646 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CHD1O14646 PTCHD3P3-201ENST00000403073 906 ntBASIC28.84■■■□□ 2.21
CHD1O14646 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC28.84■■■□□ 2.21
CHD1O14646 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC28.84■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms