Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.77■□□□□ 0.11
MBD3L5A6NJ08 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 COX5BP2-201ENST00000392354 334 ntBASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AL049840.3-201ENST00000602669 611 ntBASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AC023511.2-201ENST00000618803 211 ntBASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 AD001527.2-201ENST00000622994 785 ntBASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MBD3L5A6NJ08 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 PMPCAP1-201ENST00000508114 1576 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 NKAPP1-205ENST00000585790 367 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AC025062.2-201ENST00000605477 670 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AF228730.7-201ENST00000641842 219 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AC079776.2-201ENST00000641154 1609 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AL138781.2-201ENST00000617896 1843 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AC093503.3-201ENST00000624917 2352 ntBASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.75■□□□□ 0.11
MBD3L5A6NJ08 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 TNXA-203ENST00000507684 2038 ntBASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 PMS2P1-201ENST00000431037 1228 ntBASIC15.74■□□□□ 0.11
MBD3L5A6NJ08 RPS2P1-201ENST00000434010 821 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms