Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC01546A6NGU7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 MIPEPP3-201ENST00000412105 444 ntBASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC004980.1-204ENST00000429707 299 ntBASIC12.7□□□□□ -0.38
LINC01546A6NGU7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC116407.2-201ENST00000613639 860 ntBASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.7□□□□□ -0.38
LINC01546A6NGU7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC01546A6NGU7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 UNC93B4-201ENST00000505679 747 ntBASIC12.69□□□□□ -0.38
LINC01546A6NGU7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms