Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC163A0A0D9SF12 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 HTR5BP-201ENST00000430851 1154 ntBASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AP002472.1-201ENST00000577490 586 ntBASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC163A0A0D9SF12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 ELL2P1-201ENST00000413990 1906 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 HCG4B-203ENST00000450128 991 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 ALG1L5P-201ENST00000482043 771 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 IGHV3-65-201ENST00000523210 341 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC008667.4-201ENST00000607370 168 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC073592.5-201ENST00000624854 528 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 AC073130.3-201ENST00000624389 2278 ntBASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC163A0A0D9SF12 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AC010460.3-201ENST00000511359 1579 ntBASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 COX5BP2-201ENST00000392354 334 ntBASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AC092865.6-201ENST00000642101 219 ntBASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 AC004817.3-201ENST00000602957 2129 ntBASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms