Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AC009065.1-201ENST00000564055 1225 ntBASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 MIR3180-4-201ENST00000582223 153 ntBASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN6Q9Y6Q1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CAPN6Q9Y6Q1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 ITM2C-210ENST00000620962 501 ntBASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 AC092338.2-201ENST00000568827 1415 ntBASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN6Q9Y6Q1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 AC233702.5-201ENST00000584107 538 ntBASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 AC010240.3-201ENST00000607688 395 ntBASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 AL049637.2-201ENST00000641778 930 ntBASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms