Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 INTS4P1-201ENST00000438455 1935 ntBASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 LINC01126-201ENST00000623515 1646 ntBASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AC093909.1-201ENST00000504731 1122 ntBASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AC138932.1-201ENST00000534164 6830 ntBASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1G3Q9Y6M4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 SCARNA2-201ENST00000458748 420 ntBASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSNK1G3Q9Y6M4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 AC018712.1-201ENST00000455767 687 ntBASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 FGFR3P6-201ENST00000457012 610 ntBASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 AC023511.2-201ENST00000618803 211 ntBASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1G3Q9Y6M4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CSNK1G3Q9Y6M4 IL9RP2-201ENST00000423948 1312 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms