Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC4Q9Y696 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.58■□□□□ 0.88
CLIC4Q9Y696 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 AL391807.1-203ENST00000604392 2365 ntBASIC20.57■□□□□ 0.88
CLIC4Q9Y696 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.57■□□□□ 0.88
CLIC4Q9Y696 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 SPDYE15P-201ENST00000424157 909 ntBASIC20.56■□□□□ 0.88
CLIC4Q9Y696 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AC140113.3-201ENST00000605663 199 ntBASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AC011558.1-201ENST00000623459 338 ntBASIC20.56■□□□□ 0.88
CLIC4Q9Y696 AC141586.5-201ENST00000624546 2050 ntBASIC20.56■□□□□ 0.88
CLIC4Q9Y696 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLIC4Q9Y696 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 LIN28AP1-201ENST00000429574 405 ntBASIC20.55■□□□□ 0.88
CLIC4Q9Y696 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 COX11P1-201ENST00000489116 835 ntBASIC20.55■□□□□ 0.88
CLIC4Q9Y696 AC034232.1-201ENST00000506026 1064 ntBASIC20.55■□□□□ 0.88
CLIC4Q9Y696 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 AC097493.4-201ENST00000641197 219 ntBASIC20.55■□□□□ 0.88
CLIC4Q9Y696 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 AC108860.2-201ENST00000562760 2183 ntBASIC20.55■□□□□ 0.88
CLIC4Q9Y696 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLIC4Q9Y696 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLIC4Q9Y696 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms