Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AL596257.1-201ENST00000641463 2694 ntBASIC17.09■□□□□ 0.33
GPC6Q9Y625 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.08■□□□□ 0.33
GPC6Q9Y625 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.08■□□□□ 0.33
GPC6Q9Y625 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC6Q9Y625 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.08■□□□□ 0.33
GPC6Q9Y625 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 AC073912.3-201ENST00000624414 853 ntBASIC17.08■□□□□ 0.32
GPC6Q9Y625 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC6Q9Y625 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC6Q9Y625 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 CYP2D8P-201ENST00000433633 1490 ntBASIC17.07■□□□□ 0.32
GPC6Q9Y625 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 KRT8P9-201ENST00000558927 1449 ntBASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC092338.2-201ENST00000568827 1415 ntBASIC17.07■□□□□ 0.32
GPC6Q9Y625 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC010947.1-201ENST00000623454 693 ntBASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC010653.2-201ENST00000623505 997 ntBASIC17.07■□□□□ 0.32
GPC6Q9Y625 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC6Q9Y625 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC6Q9Y625 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 AC036111.1-201ENST00000533973 1582 ntBASIC17.06■□□□□ 0.32
GPC6Q9Y625 FLJ13224-201ENST00000313737 1514 ntBASIC17.06■□□□□ 0.32
GPC6Q9Y625 CICP6-201ENST00000457191 2729 ntBASIC17.06■□□□□ 0.32
GPC6Q9Y625 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 AC087499.1-201ENST00000418141 1075 ntBASIC17.06■□□□□ 0.32
GPC6Q9Y625 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms