Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 POM121L3P-201ENST00000419331 1163 ntBASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 BNIP3P18-201ENST00000593976 575 ntBASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB2Q9Y5E7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AC009078.2-202ENST00000463353 338 ntBASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AL160237.2-201ENST00000556165 472 ntBASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 AC009154.2-201ENST00000621177 724 ntBASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB2Q9Y5E7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 ABALON-201ENST00000629058 1903 ntBASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB2Q9Y5E7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 AKR1C7P-201ENST00000305623 895 ntBASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 AC005336.2-201ENST00000593183 939 ntBASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB2Q9Y5E7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHB2Q9Y5E7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms