Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 BX664615.1-201ENST00000443558 458 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 KRT18P57-201ENST00000443599 1254 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AL138966.2-201ENST00000621997 464 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AC112497.1-201ENST00000624824 639 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AC092865.7-201ENST00000641832 219 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AC099343.3-201ENST00000605834 2503 ntBASIC14.6□□□□□ -0.07
FOXA2Q9Y261 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXA2Q9Y261 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC140113.3-201ENST00000605663 199 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AL031432.5-201ENST00000641059 760 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 SIRPAP1-201ENST00000448467 1770 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 AC012317.2-201ENST00000623305 2251 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 LINC01126-201ENST00000623515 1646 ntBASIC14.59□□□□□ -0.07
FOXA2Q9Y261 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXA2Q9Y261 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.58□□□□□ -0.07
FOXA2Q9Y261 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
FOXA2Q9Y261 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
FOXA2Q9Y261 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms