Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 AKR1C7P-201ENST00000305623 895 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 IGHGP-201ENST00000390555 1178 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 AP000593.1-201ENST00000393668 712 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 TSPY12P-201ENST00000421279 868 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 IGHV3-47-201ENST00000425060 335 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 GUSBP12-201ENST00000513727 720 ntBASIC17.65■□□□□ 0.42
SATB2Q9UPW6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SATB2Q9UPW6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
SATB2Q9UPW6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SATB2Q9UPW6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.64■□□□□ 0.42
SATB2Q9UPW6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 AC004408.2-201ENST00000623613 2777 ntBASIC17.64■□□□□ 0.41
SATB2Q9UPW6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 NUS1P2-201ENST00000417358 873 ntBASIC17.64■□□□□ 0.41
SATB2Q9UPW6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 VENTXP7-201ENST00000475503 772 ntBASIC17.64■□□□□ 0.41
SATB2Q9UPW6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 AC034236.2-201ENST00000606662 1610 ntBASIC17.64■□□□□ 0.41
SATB2Q9UPW6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SATB2Q9UPW6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 AL590627.1-203ENST00000421194 1026 ntBASIC17.63■□□□□ 0.41
SATB2Q9UPW6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
SATB2Q9UPW6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 AC083906.6-201ENST00000641366 219 ntBASIC17.63■□□□□ 0.41
SATB2Q9UPW6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 OR6D1P-202ENST00000641007 5290 ntBASIC17.63■□□□□ 0.41
SATB2Q9UPW6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SATB2Q9UPW6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms