Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 RBM17P1-201ENST00000453646 1190 ntBASIC17.05■□□□□ 0.32
VAPAQ9P0L0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 AC010240.3-201ENST00000607688 395 ntBASIC17.05■□□□□ 0.32
VAPAQ9P0L0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VAPAQ9P0L0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 AL138688.1-201ENST00000624851 1594 ntBASIC17.04■□□□□ 0.32
VAPAQ9P0L0 UNC93B2-201ENST00000285383 730 ntBASIC17.04■□□□□ 0.32
VAPAQ9P0L0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 BX088651.1-201ENST00000540551 451 ntBASIC17.04■□□□□ 0.32
VAPAQ9P0L0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 CROCCP2-202ENST00000412962 2773 ntBASIC17.04■□□□□ 0.32
VAPAQ9P0L0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VAPAQ9P0L0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 AC084018.2-201ENST00000613093 2607 ntBASIC17.03■□□□□ 0.32
VAPAQ9P0L0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 AC007663.1-201ENST00000438948 1240 ntBASIC17.03■□□□□ 0.32
VAPAQ9P0L0 CCR12P-201ENST00000446203 998 ntBASIC17.03■□□□□ 0.32
VAPAQ9P0L0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 Z99916.2-201ENST00000604037 246 ntBASIC17.03■□□□□ 0.32
VAPAQ9P0L0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VAPAQ9P0L0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VAPAQ9P0L0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms