Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC008550.1-201ENST00000511500 884 ntBASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 SLC25A1P4-201ENST00000567977 778 ntBASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 AP001412.1-201ENST00000608405 714 ntBASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 AC233702.5-201ENST00000584107 538 ntBASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 AP006294.2-201ENST00000641667 209 ntBASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 AL049637.2-201ENST00000641778 930 ntBASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 FSCN1P1-201ENST00000568912 1481 ntBASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 AL024508.2-201ENST00000607749 1894 ntBASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SMARCAL1Q9NZC9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMARCAL1Q9NZC9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 AC113410.3-201ENST00000623366 203 ntBASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms