Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 MIR663A-201ENST00000385250 93 ntBASIC17.48■□□□□ 0.39
NDE1Q9NXR1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDE1Q9NXR1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 AC131212.4-201ENST00000623606 975 ntBASIC17.47■□□□□ 0.39
NDE1Q9NXR1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 AC093010.1-201ENST00000473625 1624 ntBASIC17.47■□□□□ 0.39
NDE1Q9NXR1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.47■□□□□ 0.39
NDE1Q9NXR1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 AC080038.1-201ENST00000611274 1154 ntBASIC17.46■□□□□ 0.39
NDE1Q9NXR1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 AC073111.5-205ENST00000641717 521 ntBASIC17.46■□□□□ 0.39
NDE1Q9NXR1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
NDE1Q9NXR1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.38
NDE1Q9NXR1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDE1Q9NXR1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
NDE1Q9NXR1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
NDE1Q9NXR1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms