Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 AC022898.2-201ENST00000616822 1312 ntBASIC19.23■□□□□ 0.67
CISHQ9NSE2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 AC100803.2-201ENST00000562459 1963 ntBASIC19.23■□□□□ 0.67
CISHQ9NSE2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 AC016734.2-201ENST00000624325 1377 ntBASIC19.22■□□□□ 0.67
CISHQ9NSE2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.22■□□□□ 0.67
CISHQ9NSE2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 AC068472.1-201ENST00000474589 881 ntBASIC19.22■□□□□ 0.67
CISHQ9NSE2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 AL121672.3-201ENST00000608644 468 ntBASIC19.22■□□□□ 0.67
CISHQ9NSE2 AC091076.1-201ENST00000610741 619 ntBASIC19.22■□□□□ 0.67
CISHQ9NSE2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CISHQ9NSE2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.22■□□□□ 0.67
CISHQ9NSE2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 KRT18P55-202ENST00000578578 1546 ntBASIC19.21■□□□□ 0.67
CISHQ9NSE2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 AC008764.6-201ENST00000595909 2069 ntBASIC19.21■□□□□ 0.67
CISHQ9NSE2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CISHQ9NSE2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.21■□□□□ 0.67
CISHQ9NSE2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.2■□□□□ 0.66
CISHQ9NSE2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CISHQ9NSE2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 RN7SL606P-201ENST00000472779 293 ntBASIC19.2■□□□□ 0.66
CISHQ9NSE2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.2■□□□□ 0.66
CISHQ9NSE2 GUSBP12-201ENST00000513727 720 ntBASIC19.2■□□□□ 0.66
CISHQ9NSE2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 AC090616.6-201ENST00000582640 721 ntBASIC19.2■□□□□ 0.66
CISHQ9NSE2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CISHQ9NSE2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CISHQ9NSE2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
CISHQ9NSE2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CISHQ9NSE2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CISHQ9NSE2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CISHQ9NSE2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CISHQ9NSE2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms