Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AP003041.3-201ENST00000527151 707 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AL353719.1-201ENST00000566847 864 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AP005242.2-201ENST00000580065 1175 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AL023803.3-201ENST00000615559 522 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AC112497.1-201ENST00000624824 639 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 PCDHA12-202ENST00000613593 2588 ntBASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDC42SE2Q9NRR3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC080080.1-201ENST00000625121 2420 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ABHD17AP1-201ENST00000358206 933 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 RPS2P55-201ENST00000397318 883 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AL355355.2-201ENST00000442321 338 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC107956.1-201ENST00000494359 873 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AL138688.1-201ENST00000624851 1594 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 AC133963.1-201ENST00000504166 1679 ntBASIC12.42□□□□□ -0.42
CDC42SE2Q9NRR3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms