Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SPHK2Q9NRA0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 KRT8P47-201ENST00000604727 1398 ntBASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SPHK2Q9NRA0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK2Q9NRA0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 AL096828.2-201ENST00000567259 1965 ntBASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 AL356309.3-201ENST00000624132 1934 ntBASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 SART3-203ENST00000546611 1184 ntBASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 AC098818.2-201ENST00000564925 2320 ntBASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK2Q9NRA0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 AC010460.3-201ENST00000511359 1579 ntBASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 RPS2P28-201ENST00000314255 741 ntBASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.31■□□□□ 0.52
SPHK2Q9NRA0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms