Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 AC022898.2-201ENST00000616822 1312 ntBASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 CCR12P-201ENST00000446203 998 ntBASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC52A3Q9NQ40 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 UNC93B2-201ENST00000285383 730 ntBASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 INGX-201ENST00000359239 846 ntBASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 AC010653.2-201ENST00000623505 997 ntBASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC52A3Q9NQ40 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AL390955.1-201ENST00000428694 934 ntBASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AP006294.2-201ENST00000641667 209 ntBASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AC116562.4-202ENST00000641738 218 ntBASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC52A3Q9NQ40 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC52A3Q9NQ40 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms